Function
convertPairWiseToGlobalAlignment
Converts pair-wise alignments to a multiple global alignment.
Include Headers
seqan/store.h
Parameters
|  The fragment store. Types:  FragmentStore | |
|  A string of anchored contig gaps for every pairwise alignment. | 
Remarks
 Before calling this function the gaps  structures in the contigStore must be empty, i.e. there are no gaps in the contig.
The pairwise alignment gaps of the reads are stored in the gaps  structure in the alignedReadStore, whereas the pairwise alignment gaps of the contig are stored in the pairwiseContigGaps  string.
 After calling this functions all positions in the alignedReadStore are in gap-space.
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