Tag
Global Alignment Algorithms
Global alignment algorithm used by globalAlignment.
Include Headers
seqan/basic.h
Functions
| Computes the best global alignment of the two sequences. | 
Values
|  
	Dynamic programming algorithm for alignments by Needleman and Wunsch. | |
|  
	The Needleman-Wunsch alignment algorithm in a banded version. | |
|  
	Gotoh's affine gap cost alignment algorithm. | |
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	Gotoh's affine gap cost alignment algorithm in a banded version. | |
|  
	Myers' bit vector alignment algorithm for edit distance.
	Note that this algorithm does not returns the alignment itself, but only computes the score. | |
|  
	Myers' bit vector algorithm for edit distance combined with Hirschberg's linear space alignment algorithm. | |
|  
	Hirschberg's linear space global alignment algorithm. | |
|  
	Longest common subsequence algorithm. | 
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