Function
alignmentEvaluation
Given a multiple alignment, this function calculates all kinds of alignment statistics.
Include Headers
seqan/graph_msa.h
Parameters
|  An alignment graph. Types:  Alignment Graph | |
|  A score object. Types:  Score | |
|  Number of gap extensions. | |
|  Number of gaps. | |
|  Number of aligned pairs. | |
|  Counter for each pair. | |
|  Alignment length. | 
Return Values
 Score of the alignment.
SeqAn - Sequence Analysis Library - www.seqan.de