Tag
Local Alignment Algorithms
Local alignment algorithm used by localAlignment.
Include Headers
seqan/basic.h
Functions
| Computes the best local alignment of two sequences. | |
| Computes the best local alignment of two sequences. | |
| Computes the best local alignment of two sequences. | 
Values
|  
	Triggers a Smith Waterman local alignment algorithm. | |
|  
	Triggers a banded version of the Smith Waterman local alignment algorithm. | |
|  
	Local alignment algorithm by Waterman and Eggert with "declumping" (i.e. only non-overlapping local alignments are computed). | |
|  
	Same as  | |
|  
	Triggers a banded version of the local alignment algorithm by Waterman and Eggert with "declumping". | |
|  
	Same as  | 
SeqAn - Sequence Analysis Library - www.seqan.de